Author

Mathi Thiruppathy

University of Southern CaliforniaORCID 0000-0002-6337-3256Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

Click to filter author papers

Developmental Biology· 3

Signature Assays, Organisms & Methods

Click to filter · or open tag

Approach:experimental assay· 3 Organism:zebrafish· 3 Research Focus:cell type annotation· 2 Research Focus:differential expression· 2 Approach:statistical model· 2 Assay:ATAC-seq· 1 Research Focus:drug response / drug discovery· 1 Research Focus:gene regulatory network inference· 1

Frequent Co-Authors

Justin Gage CrumpiD· 3 shared Claire ArataiD· 2 shared Péter FábiániD· 2 shared Dev Subramanie· 1 shared Dion Giovannone· 1 shared Hung-Jhen CheniD· 1 shared J. Andrew GillisiD· 1 shared Joanna SmeetoniD· 1 shared

Activity by Year

2022-2024 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 26 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

3 shared papersDevelopmental Biology

Justin Gage CrumpORCID

Mutual co-authors in cluster

Author profile →

3 papers

Recent·Most cited

Retinoic acid signaling suppresses chondrocyte identity during cartilage development and regeneration

Claire Arata, Sandeep Paul, Simone Schindler, Mathi Thiruppathy, Mackenzie Flath, Dion Giovannone, Zack Hammer, Dev Subramanie, Justin Gage Crump

This study shows retinoic acid signaling suppresses chondrocyte identity during cartilage development and regeneration in zebrafish, with implications for treating Multiple Osteochondromas.

bioRxiv · May 10, 2024 · PreprintDevelopmental Biology

Gill developmental program in the teleost mandibular arch

Mathi Thiruppathy, Péter Fábián, J. Andrew Gillis, Justin Gage Crump

The paper shows that the zebrafish pseudobranch develops from mandibular arch tissues and shares features with gills, supporting the hypothesis that vertebrate jaws evolved from modified gills.

eLife · May 30, 2022Peer-reviewedDevelopmental Biology

Lifelong single-cell profiling of cranial neural crest diversification

Péter Fábián, Kuo-Chang Tseng, Mathi Thiruppathy, Claire Arata, Hung-Jhen Chen, Joanna Smeeton, Nellie E. Nelson, Justin Gage Crump

The paper integrates single-cell transcriptome and chromatin accessibility data from zebrafish cranial neural crest cells across their lifetime to identify region-specific chromatin remodeling and lineage-priming factors.

Nature Communications · Jan 10, 2022Peer-reviewedDevelopmental Biology