Author

Daiki Matsunaga

The University of OsakaORCID 0000-0002-6407-7766Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Assay:imaging· 2 Organism:C. elegans· 1 Research Focus:cell signaling & trafficking· 1 Approach:diffusion model· 1 Approach:experimental assay· 1 Assay:fluorescence / live-cell microscopy· 1 Research Focus:spatial domain detection· 1 Approach:statistical model· 1

Frequent Co-Authors

Shinji DeguchiiD· 2 shared Hiromasa Shiraiwa· 1 shared Honghan LiiD· 1 shared Koichiro Akiyama· 1 shared Masahito HayashiiD· 1 shared Outa Nakashima· 1 shared Shiyou LiuiD· 1 shared Shunsuke Shiomi· 1 shared

Activity by Year

2023-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 16 mutual co-author links

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2 shared papersBiophysics

Shinji DeguchiORCID

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3 papers

Recent·Most cited

BiophysicsBiophysics and PhysicobiologyPeer-reviewedJan 1, 2026

Chlamylipo, a Chlamydomonas-in-liposome microswimmer: self-propelled swimming and associated lipid membrane flow

Shunsuke Shiomi, Koichiro Akiyama, Hiromasa Shiraiwa…·Masahito Hayashi

This paper introduces chlamylipo, a bio-hybrid microswimmer using Chlamydomonas reinhardtii in a liposome, demonstrating propulsion through membrane deformation and fluid dynamics.

DOI 10.2142/biophysico.bppb-v23.0019

C. elegansimaging

𝕏 PostBluesky

BiophysicsbioRxivPreprintFeb 8, 2025

Mapping molecular diffusion across the whole cell with spatial statistics-based FRAP

Yohei Okabe, Takumi Saito, Outa Nakashima…·Shinji Deguchi

This paper introduces Pro-FRAP, a method that enhances FRAP analysis to map whole-cell molecular diffusion with improved spatial coverage and statistical reliability.

DOI 10.1101/2025.02.08.637213

fluorescence / live-cell microscopystatistical model

𝕏 PostBluesky

BioinformaticsbioRxivPreprintJan 12, 2023

Knowledge "installed" diffusion model predicts the geometry of actin cytoskeleton from cell morphology

Honghan Li, Shiyou Liu, Shinji Deguchi, Daiki Matsunaga

The paper introduces a diffusion model that predicts stress fiber distribution from cell morphology, achieving 79.3% overlap with experimental data and revealing geometric relationships.

1 citation

imagingdiffusion model

𝕏 PostBluesky