Author

Alexey Kalmykov

ORCID 0000-0002-6939-5544Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

Click to filter author papers

Signature Assays, Organisms & Methods

Click to filter · or open tag

Assay:DNA methylation· 2 Approach:statistical model· 2 Research Focus:database / resource· 1 Approach:experimental assay· 1 Research Focus:host-pathogen & immune response· 1 Organism:human· 1 Research Focus:variant calling· 1 Assay:whole-genome sequencing· 1

Frequent Co-Authors

Sabine ReinholdiD· 3 shared Svend Illum HanseniD· 3 shared Anatoly R. Kantorovich· 2 shared Vladimir Е. MasloviD· 2 shared Adeline VautriniD· 1 shared Áine HalpiniD· 1 shared Aleksander ChrószcziD· 1 shared Alexandra BuzhilovaiD· 1 shared

Activity by Year

2019-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 28 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

3 shared papersGenomics

Sabine ReinholdORCID

Mutual co-authors in cluster

Author profile →

3 papers

Recent·Most cited

GenomicsbioRxivPreprintSep 6, 2026

PIGSTI: a modular, reproducible pipeline for detecting species identity, pathogens, and microbes from animal palaeogenomic data

Louis L’Hôte, Catherine Butt, Áine Halpin…·Kevin G. Daly

PIGSTI detects species identity, pathogens, and microbes in ancient animal genomic data, identifying 15 zoonotic pathogens including Rickettsia felis and Leptospira borgpetersenii.

DOI 10.64898/2026.09.01.748539

whole-genome sequencingstatistical model

𝕏 PostBluesky

MicrobiologybioRxivPreprintFeb 12, 2025

Probing the zooarchaeological record across time and space for ancient pathogens

Anne Kathrine Wiborg Runge, Ian C. Light-Maka, Ken Massy…·Felix M. Key

The paper examines ancient pathogens in zooarchaeological remains to identify zoonotic diseases and validate their authenticity using genetic and palaeopathological methods.

5 citations

DNA methylationexperimental assay

𝕏 PostBluesky

GenomicsNature CommunicationsPeer-reviewedFeb 3, 2019

The genetic prehistory of the Greater Caucasus

Chuan‐Chao Wang, Sabine Reinhold, Alexey Kalmykov…·Wolfgang Haak

The paper analyzes genetic data from prehistoric individuals in the North Caucasus to explore the origins of Eurasian steppe ancestry and its relationship to cultural innovations.

222 citationstop 1%

humanDNA methylation

𝕏 PostBluesky