Author

Orr Shomroni

Universitätsmedizin GöttingenORCID 0000-0002-8009-2392Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 1 Developmental Biology· 1 Genomics· 1

Signature Assays, Organisms & Methods

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Research Focus:differential expression· 3 Research Focus:gene regulatory network inference· 3 Assay:bulk RNA-seq· 2 Research Focus:cell type annotation· 2 Approach:experimental assay· 2 Organism:human· 2 Approach:statistical model· 2 Research Focus:database / resource· 1

Frequent Co-Authors

Abdul Sattar· 1 shared Abhivyakti Gautam· 1 shared Alexia TascaiD· 1 shared Bernd WollnikiD· 1 shared Daniel Sumner MagruderiD· 1 shared Dingyuan Iris SuniD· 1 shared Fabian Ludewig· 1 shared Gabriela SalinasiD· 1 shared

Activity by Year

2018-2021 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 12 mutual co-author links

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1 shared paperBioinformatics

Abdul Sattar

Mutual co-authors in cluster

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3 papers

Recent·Most cited

GenomicsbioRxivPreprintOct 25, 2021

A novel single-cell RNA-sequencing platform and its applicability connecting genotype to phenotype in ageing-disease

Orr Shomroni, Maren Sitte, Julia Schmidt…·Gabriela Salinas

This study introduces a novel single-cell RNA-sequencing platform and applies it to analyze genotype-phenotype relationships in ageing disorders.

DOI 10.1101/2021.10.25.465702

𝕏 PostBluesky

Developmental BiologyCell ReportsPeer-reviewedSep 1, 2019

ΔN-Tp63 mediates Wnt/β-catenin-induced inhibition of differentiation in basal stem cells of mucociliary epithelia

Maximilian Haas, José Luis Gómez-Vázquez, Dingyuan Iris Sun…·Peter Walentek

This study identifies ΔN-Tp63 as a key mediator of Wnt/β-catenin signaling in basal stem cells of mucociliary epithelia, showing its role in inhibiting differentiation and promoting hyperplasia.

63 citations

𝕏 PostBluesky

BioinformaticsBMC BioinformaticsPeer-reviewedFeb 14, 2018

Oasis2.0: improved online analysis of small RNA-seq data

Raza‐Ur Rahman, Abhivyakti Gautam, Jörn Bethune…·Stefan Bonn

Oasis2.0 improves small RNA-seq analysis by enhancing detection, classification, and visualization of small RNAs across organisms and identifying cross-species miRNAs and viral/bacterial sRNAs.

83 citationstop 4%

bulk RNA-seqstatistical model

𝕏 PostBluesky