Author

Athanasios Fysikopoulos

Justus-Liebig-Universität GießenORCID 0000-0002-8081-0198Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Developmental Biology· 1 Molecular Biology· 1

Signature Assays, Organisms & Methods

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Research Focus:cell type annotation· 2 Approach:experimental assay· 2 Organism:human· 2 Organism:mouse· 2 Assay:bulk RNA-seq· 1 Research Focus:differential expression· 1 Research Focus:gene regulatory network inference· 1 Assay:spatial transcriptomics· 1

Frequent Co-Authors

Alexandros SountoulidisiD· 2 shared Andreas LiontosiD· 2 shared Christos SamakovlisiD· 2 shared Werner SeegeriD· 2 shared Alexandra B. FirsovaiD· 1 shared Andreas GüntheriD· 1 shared Chunyan Lu· 1 shared Clemens RuppertiD· 1 shared

Activity by Year

2020-2022 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 37 mutual co-author links

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2 shared papersDevelopmental Biology

Alexandros SountoulidisORCID

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2 papers

Recent·Most cited

An essential function for autocrine Hedgehog signaling in epithelial proliferation and differentiation in the trachea

Wenguang Yin, Andreas Liontos, Janine Koepke, Maroua Ghoul, Luciana C. Mazzocchi, Xinyuan Liu, Chunyan Lu, Haoyu Wu, Athanasios Fysikopoulos, Alexandros Sountoulidis, Werner Seeger, Clemens Ruppert, Andreas Günther, Didier Y. R. Stainier, Christos Samakovlis

This study identifies an autocrine role for Hedgehog signaling in regulating epithelial cell proliferation and differentiation in the trachea.

Development · Feb 1, 2022Peer-reviewedDevelopmental Biology

SCRINSHOT, a spatial method for single-cell resolution mapping of cell states in tissue sections

Alexandros Sountoulidis, Andreas Liontos, Hong Phuong Nguyen, Alexandra B. Firsova, Athanasios Fysikopoulos, Xiaoyan Qian, Werner Seeger, Erik Sundström, Mats F. Nilsson, Christos Samakovlis

SCRINSHOT maps cell states in tissue sections at single-cell resolution, showing high correlation with scRNA-Seq data and enabling detailed spatial analysis of cell types.

PLoS Biology · Nov 20, 2020Peer-reviewedMolecular Biology