Author

Gary Price Cofer

Duke UniversityORCID 0000-0002-8086-9317Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

Click to filter author papers

Signature Assays, Organisms & Methods

Click to filter · or open tag

Organism:mouse· 5 Assay:imaging· 3 Approach:statistical model· 3 Research Focus:benchmarking· 2 Approach:experimental assay· 2 Research Focus:spatial domain detection· 2 Assay:bulk RNA-seq· 1 Research Focus:cell-cell communication· 1

Frequent Co-Authors

G. Allan JohnsoniD· 5 shared Yi Peng QiiD· 5 shared Kathryn J. HornburgiD· 4 shared Nian WangiD· 3 shared Adam Hall· 2 shared Fang-Cheng F. YehiD· 2 shared James C. Cook· 2 shared James C. GeeiD· 2 shared

Activity by Year

2020-2024 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

5 shared papersNeuroscience

G. Allan JohnsonORCID

Mutual co-authors in cluster

Author profile →

5 papers

Recent·Most cited

Transcriptome Analysis Identifies An ASD-Like Phenotype In Oligodendrocytes And Microglia From C58/J Amygdala That Is Dependent On Sex and Sociability

George D. Dalton, Stephen K. Siecinski, Viktoriya D. Nikolova, Gary Price Cofer, Kathryn J. Hornburg, Yi Peng Qi, G. Allan Johnson, Yong‐hui Jiang, Sheryl S. Moy, Simon G. Gregory

This study identifies ASD-like transcriptomic changes in oligodendrocytes and microglia of C58/J mice amygdala, dependent on sex and sociability, using bulk RNA-Seq and snRNA-Seq.

Behavioral and Brain Functions · Jun 19, 2024Peer-reviewedNeuroscience

Resolution and b value dependent Structural Connectome in ex vivo Mouse Brain

Stephanie Crater, Surendra Maharjan, Yi Peng Qi, Qi Zhao, Gary Price Cofer, James C. Cook, G. Allan Johnson, Nian Wang

This study investigates how resolution and b value affect structural connectome in ex vivo mouse brains, finding that higher angular resolution and b value improve tractography and connectome stability.

NeuroImage · Apr 10, 2022Peer-reviewedNeuroscience

HiDiver: A Suite of Methods to Merge Magnetic Resonance Histology, Light Sheet Microscopy, and Complete Brain Delineations

G. Allan Johnson, Yuqi Tian, Gary Price Cofer, James C. Cook, James C. Gee, Adam Hall, Kathryn J. Hornburg, Yi Peng Qi, Fang-Cheng F. Yeh, Nian Wang, LEONARD E. WHITE, Robert W. Williams

HiDiver integrates multimodal brain imaging data to enable 3D quantitative analysis of brain structure and function in mice.

bioRxiv · Feb 10, 2022 · PreprintNeuroscience

Multimodal Magnetic Resonance Histology and Light Sheet Imaging for Quantitative Neurogenetics of the Mouse

G. Allan Johnson, Gary Price Cofer, James Cook, James C. Gee, Adam Hall, Kathryn J. Hornburg, Yi Peng Qi, Yuqi Tian, Fang-Cheng F. Yeh, Nian Wang, LEONARD E. WHITE, Robert W. Williams

The paper develops a combined MRI and light sheet imaging approach to generate high-resolution brain phenotypes for neurogenetic studies in mice.

bioRxiv · Oct 8, 2021 · PreprintNeuroscience

A time-course study of actively stained mouse brains: DTI parameter and connectomic stability over one year

Jaclyn Xiao, Kathryn J. Hornburg, Gary Price Cofer, James J. H. Cook, Yi Peng Qi, G. Allan Johnson

This study examines DTI parameters and connectomic stability in fixed mouse brains over one year, finding that most metrics stabilize within two weeks of fixation.

bioRxiv · Dec 2, 2020 · PreprintNeuroscience