Junyi Chen

The paper evaluates CycloneSEQ long-read sequencing for improving bacterial genome assemblies, showing it can produce complete circular genomes when combined with short-read data.

The paper constructs a near-complete genome assembly for the bearded dragon Pogona vitticeps and characterizes the Z sex chromosome, identifying key genes involved in sex determination.

This paper introduces an improved nanopore sequencing platform called CycloneSEQ, demonstrating long-duration sequencing and high yield with applications in genomics.

This paper introduces scDEAL, a deep transfer learning framework that predicts cancer drug responses from single-cell RNA-seq data by integrating bulk RNA-seq drug response data and interpretable gene signatures.