Author

Cynthia X. Ma

Washington University in St. LouisORCID 0000-0002-8156-7492Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Cancer Biology· 1 Systems Biology· 1

Signature Assays, Organisms & Methods

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Research Focus:drug response / drug discovery· 2 Research Focus:benchmarking· 1 Research Focus:cancer & tumor microenvironment· 1 Research Focus:chromatin & epigenetic regulation· 1 Research Focus:differential expression· 1 Approach:experimental assay· 1 Approach:graph neural network· 1 Organism:human· 1

Frequent Co-Authors

Ben T. JordaniD· 1 shared Benjamin A. GarciaiD· 1 shared Hamza AhmediD· 1 shared Ian S. HagemanniD· 1 shared Jacob HsiaiD· 1 shared Jesus Iraheta· 1 shared Joanna M. GongoraiD· 1 shared John R. EdwardsiD· 1 shared

Activity by Year

2022-2025 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 24 mutual co-author links

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1 shared paperSystems Biology

Ben T. JordanORCID

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2 papers

Recent·Most cited

Cancer BiologybioRxivPreprintJul 6, 2025

HER2; p53 Co-mutated Cancers Show Increased Histone Acetylation and are Sensitive to Neratinib plus Trastuzumab Deruxtecan.

Xiaoqing Cheng, Jacob Hsia, Jesus Iraheta…·Ron Bose

This study shows that HER2 and TP53 co-mutant cancers have increased histone acetylation and are sensitive to neratinib plus trastuzumab deruxtecan.

DOI 10.1101/2025.07.06.663368

mouseexperimental assay

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Systems BiologyNature CommunicationsPeer-reviewedJul 25, 2022

KSTAR: An algorithm to predict patient-specific kinase activities from phosphoproteomic data

Sam Crowl, Ben T. Jordan, Hamza Ahmed…·Kristen M. Naegle

KSTAR predicts patient-specific kinase activities from phosphoproteomic data, improving comparison across labs and identifying tissue-specific profiles and treatment responses.

35 citations

humanproteomics

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