Author

Vijay Venu Thiyagarajan

The University of Texas at AustinORCID 0000-0002-8244-7150Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Genomics· 1 Neuroscience· 1

Signature Assays, Organisms & Methods

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Research Focus:benchmarking· 1 Research Focus:cell-cell communication· 1 Approach:deep learning· 1 Research Focus:differential expression· 1 Approach:experimental assay· 1 Research Focus:gene regulatory network inference· 1 Assay:imaging· 1 Organism:mouse· 1

Frequent Co-Authors

Arlo SheridaniD· 2 shared Kristen M. HarrisiD· 2 shared Uri ManoriD· 2 shared Ana VujićiD· 1 shared Annabelle M. ColesiD· 1 shared Deevanshu GoyaliD· 1 shared Jean FaniD· 1 shared Jerry WuiD· 1 shared

Activity by Year

2024-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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2 shared papersGenomics

Arlo SheridanORCID

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Author profile →

2 papers

Recent·Most cited

Spatial imprints of emergent cardiomyocyte states in the pressure-overloaded heart

Yuening Liu, Annabelle M. Coles, Jonah Castiglione, Vijay Venu Thiyagarajan, Kalen Clifton, Deevanshu Goyal, Jerry Wu, Arlo Sheridan, Ana Vujić, Kristen M. Harris, Uri Manor, Talmo Pereira, Jean Fan, Richard Theodore Lee, Pallav Kosuri

The paper uses spatial transcriptomics to analyze cardiomyocyte states in pressure-overloaded mouse hearts, finding pro-fibrotic states linked to microenvironmental changes.

bioRxiv · May 8, 2026 · PreprintGenomics

A general method for bootstrapping dense 3D segmentations from sparse 2D annotations

Vijay Venu Thiyagarajan, Arlo Sheridan, Kristen M. Harris, Uri Manor

This paper introduces a method to generate dense 3D segmentations from sparse 2D annotations, achieving accuracy comparable to dense annotations with significantly reduced human effort.

bioRxiv · Jun 14, 2024 · PreprintNeuroscience