Author

Zion R. Perry

Yale UniversityORCID 0000-0002-8375-8436Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Molecular Biology· 2 Biochemistry· 1 Bioinformatics· 1

Signature Assays, Organisms & Methods

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Approach:statistical model· 3 Research Focus:gene regulatory network inference· 2 Organism:human· 2 Assay:long-read sequencing· 2 Approach:experimental assay· 1 Organism:mouse· 1 Organism:non-human primate· 1 Research Focus:protein structure prediction· 1

Frequent Co-Authors

Anna Marie PyleiD· 4 shared Anish Beeram· 2 shared Ananthanarayanan KumariD· 1 shared Douglas L. BlackiD· 1 shared Han WaniD· 1 shared James WohlschlegeliD· 1 shared Jeffrey ChengiD· 1 shared Logan LeeiD· 1 shared

Activity by Year

2023-2026 · peak 3/yr

Co-Author Collaboration Network

10 top collaborators · 19 mutual co-author links

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4 shared papersMolecular Biology

Anna Marie PyleORCID

Mutual co-authors in cluster

Author profile →

4 papers

Recent·Most cited

Structural features and conservation of the lncRNA HOTAIR in primates

Zion R. Perry, Anish Beeram, Logan Lee, Anna Marie Pyle

This study predicts the in cellulo secondary structure of HOTAIR in breast cancer cells and identifies conserved structural features across primates.

bioRxiv · Oct 9, 2026 · PreprintBiochemistry

A B1 SINE element within the mouse Malat1 long noncoding RNA acts as an internal ribosome entry site mediating micropeptide translation

Wen Xiao, Tanja Hann, Zion R. Perry, Vijaya Pandey, Jeffrey Cheng, James Wohlschlegel, Anna Marie Pyle, Douglas L. Black

bioRxiv · Sep 17, 2026 · PreprintMolecular Biology

Sequence alignment of the primate lineage reveals evolutionary divergence and conserved secondary structural motifs in noncoding RNAs

Anish Beeram, Zion R. Perry, Anna Marie Pyle

The paper develops a computational pipeline to align noncoding RNAs across primate genomes, revealing conserved secondary structural motifs despite rapid evolutionary divergence.

bioRxiv · May 19, 2026 · PreprintBioinformatics

Discovery of a Well-Folded Protein Interaction Hub Within the Human Long Non-Coding RNA NORAD

Ananthanarayanan Kumar, Han Wan, Zion R. Perry, Shreeya Patel, Rafael de Cesaris Araujo Tavares, Anna Marie Pyle

The paper identifies a structured protein interaction hub in the long non-coding RNA NORAD using biochemical and sequencing methods.

bioRxiv · Aug 7, 2023 · PreprintMolecular Biology