Author

François‐Xavier Stubbe

University of NamurORCID 0000-0002-8550-9046Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Assay:bulk RNA-seq· 1 Organism:C. elegans· 1 Research Focus:cell type annotation· 1 Research Focus:database / resource· 1 Research Focus:differential expression· 1 Approach:experimental assay· 1 Research Focus:host-pathogen & immune response· 1 Assay:metagenomics· 1

Frequent Co-Authors

Alannah LejeuneiD· 1 shared Alejandro PirontiiD· 1 shared Andrew I. PeraultiD· 1 shared Anthony R. RichardsoniD· 1 shared Aryeh KormaniD· 1 shared Ashley DumontiD· 1 shared Bo ShopsiniD· 1 shared Chunyi ZhouiD· 1 shared

Activity by Year

2024-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 29 mutual co-author links

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1 shared paperMicrobiology

Alannah LejeuneORCID

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2 papers

Recent·Most cited

Germline Blastomeres transcriptomics in the presence or absence of PIE-1 during C. elegans early embryogenesis

Pauline Ponsard, François‐Xavier Stubbe, Pauline Tricquet, Craig C. Mello, Damien Hermand

The paper uses transcriptomics to study PIE-1's role in maintaining germline identity in C. elegans embryos by comparing somatic and germline blastomeres with and without PIE-1.

bioRxiv · Feb 14, 2026 · PreprintMolecular Biology

Microbiota and metabolic adaptation shape Staphylococcus aureus virulence and antimicrobial resistance during intestinal colonization

Chunyi Zhou, Miranda B. Pawline, Alejandro Pironti, Sabrina M. Morales, Andrew I. Perault, Robert J. Ulrich, Magdalena M Podkowik, Alannah Lejeune, Ashley Dumont, François‐Xavier Stubbe, Aryeh Korman, Drew R. Jones, Jonas Schlüter, Anthony R. Richardson, Paul D. Fey, , Bo Shopsin

This study shows that gut microbiota depletion allows MRSA to adapt through genetic changes that enhance colonization fitness but reduce antimicrobial resistance and virulence.

bioRxiv · May 11, 2024 · PreprintMicrobiology