Author

Małgorzata Borkowska

MRC London Institute of Medical SciencesORCID 0000-0002-8567-7218Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Developmental Biology· 2 Genomics· 1

Signature Assays, Organisms & Methods

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Research Focus:differential expression· 3 Organism:mouse· 3 Assay:bulk RNA-seq· 2 Approach:experimental assay· 2 Research Focus:cell type annotation· 1 Assay:CUT&Tag· 1 Research Focus:gene regulatory network inference· 1 Research Focus:spatial domain detection· 1

Frequent Co-Authors

Boris LenhardiD· 2 shared Ferenc MülleriD· 2 shared Harry G. LeitchiD· 2 shared Nevena CvetešićiD· 2 shared Petra HájkováiD· 2 shared Changwei YuiD· 1 shared Katherine WhitingiD· 1 shared Kerstin Hasenpusch‐TheiliD· 1 shared

Activity by Year

2018-2024 · peak 1/yr

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10 top collaborators · 24 mutual co-author links

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2 shared papersDevelopmental Biology

Boris LenhardORCID

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3 papers

Recent·Most cited

Identification of Pappa and Sall3 as Gli3 direct target genes acting downstream of cilia signalling in corticogenesis

Shinjini Basu, Lena Mautner, Katherine Whiting, Kerstin Hasenpusch‐Theil, Małgorzata Borkowska, Thomas Theil

This study identifies Pappa and Sall3 as Gli3 target genes downstream of cilia signaling in corticogenesis, showing their regulation by Gli3 in the dorsal telencephalon.

bioRxiv · Apr 16, 2024 · PreprintDevelopmental Biology

Global regulatory transitions at core promoters demarcate the mammalian germline cycle

Nevena Cvetešić, Małgorzata Borkowska, Yuki Hatanaka, Changwei Yu, Stéphane D. Vincent, Ferenc Müller, Làszlò Tora, Harry G. Leitch, Petra Hájková, Boris Lenhard

The paper identifies global regulatory transitions at core promoters during mammalian germline development, showing a shift from somatic to maternal promoter codes in oogenesis.

bioRxiv · Oct 30, 2020 · PreprintDevelopmental Biology

SLIC-CAGE: high-resolution transcription start site mapping using nanogram-levels of total RNA

Nevena Cvetešić, Harry G. Leitch, Małgorzata Borkowska, Ferenc Müller, Piero Carninci, Petra Hájková, Boris Lenhard

SLIC-CAGE enables high-resolution transcription start site mapping using nanogram-level total RNA, significantly reducing the required input compared to existing CAGE methods.

Genome Research · Dec 1, 2018Peer-reviewedGenomics