Author

Jin Jen

Mayo ClinicORCID 0000-0002-8790-9836Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Organism:human· 2 Organism:bacteria (other)· 1 Approach:benchmark study· 1 Research Focus:benchmarking· 1 Assay:bulk RNA-seq· 1 Research Focus:differential expression· 1 Approach:statistical model· 1 Assay:whole-genome sequencing· 1

Frequent Co-Authors

Aditya Vijay BhagwateiD· 1 shared Alicia AlonsoiD· 1 shared Amber M. McDonaldiD· 1 shared André M. OliveiraiD· 1 shared Asha Nair· 1 shared Bruce W. Eckloff· 1 shared Charles M. NicoletiD· 1 shared Christopher A. Hilker· 1 shared

Activity by Year

2019-2020 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 21 mutual co-author links

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1 shared paperGenomics

Aditya Vijay BhagwateORCID

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2 papers

Recent·Most cited

Multi-Platform Assessment of DNA Sequencing Performance using Human and Bacterial Reference Genomes in the ABRF Next-Generation Sequencing Study

Jonathan Foox, Scott W. Tighe, Charles M. Nicolet, Justin M. Zook, Marta S. Byrska‐Bishop, Wayne E. Clarke, Michael M. Khayat, Medhat Mahmoud, Phoebe K. Laaguiby, Zachary T. Herbert, Derek Warner, George S. Grills, Jin Jen, Shawn Levy, Jenny Xiang, , Christopher E. Mason

The paper assesses DNA sequencing performance across multiple platforms using human and bacterial reference genomes to evaluate quality and reproducibility.

bioRxiv · Jul 23, 2020 · PreprintGenomics

Impact of RNA Extraction and Target Capture Methods on RNA Sequencing Using Formalin-Fixed, Paraffin Embedded Tissues

Christopher A. Hilker, Aditya Vijay Bhagwate, Jin Sung Jang, Jeffrey G. Meyer, Asha Nair, Jaime I Davila, Amber M. McDonald, Jennifer L. Winters, Rebecca N. Wehrs, Rory A. Jackson, Joshua A. Gorman, Mine S. Cicek, André M. Oliveira, E. Aubrey Thompson, Bruce W. Eckloff, , Jin Jen

This study evaluates RNA extraction and capture methods for RNA-seq from FFPE tissues, finding high correlation in gene expression profiles with sufficient RNA quality and demonstrating improved fusion detection with TruSeq RNA Access.

bioRxiv · May 31, 2019 · PreprintGenomics