Ata Kalirad

This paper introduces a stage-structured ecological graph theory to study how community topology influences species coexistence under ecological drift.

This study shows that vitamin B12 from diet induces transgenerational inheritance of predatory behavior in nematodes through increased vitellogenin provisioning.

This study uses beetle carcasses to model nematode succession and coexistence through agent-based modeling, showing coexistence across diverse scenarios.

The paper shows that EBAX-1/ZSWIM8 destabilizes miRNAs, leading to transgenerational memory of a predatory trait in nematodes.

The paper introduces PoMoCNV, a likelihood-based method to infer evolutionary parameters of CNVs using population genetics data, validated on C. elegans datasets.

This paper proposes a noise-driven differentiation model to explain multicellular differentiation and self-organization, testing it through a cell aggregation model.

The paper uses a game-theoretical approach and individual-based modeling to explain how yeast populations switch between respiration and fermentation for glucose metabolism.

This study proposes that male infertility may result from stochastic transmission of cytoplasmically-inherited proteins during spermatogenesis, using a simple stochastic model to demonstrate reduced viable sperm proportion under certain parameters.

The paper models chemotactic behavior in E. coli using a hierarchical approach, showing the behavior can be reduced to a non-homogeneous Markov process.