Emanuel Barth

Host-derived lipids license proliferation of sterol-auxotrophic tick cells and promote flavivirus output

This study shows host-derived lipids are essential for tick cell proliferation and flavivirus output, revealing their role in regulating cellular state and viral production.

diffONT: predicting methylation-specific PCR biomarkers based on nanopore sequencing data for clinical application

diffONT predicts methylation-specific PCR biomarkers from nanopore sequencing data, improving specificity for hypermethylated regions suitable for MSP primer design.

Algal growth and morphogenesis-promoting factors released by cold-adapted bacteria contribute to the resilience and morphogenesis of the seaweed Ulva (Chlorophyta) in Antarctica (Potter Cove)

This study identifies cold-adapted bacteria that release growth-promoting factors essential for the morphogenesis of Antarctic Ulva under low temperatures.

Immunity and bacterial recruitment in plant leaves are parallel processes that together shape sensitivity to temperature stress

This study compares two Arabidopsis genotypes to show how immunity and bacterial recruitment interact to influence heat stress tolerance.

EpiDope: A Deep neural network for linear B-cell epitope prediction

EpiDope uses a deep neural network to predict linear B-cell epitopes with higher accuracy than existing tools, reducing laboratory costs and time.

VIDHOP, viral host prediction with Deep Learning

This paper introduces a deep learning method to predict viral hosts using only viral genome sequences, achieving high accuracy across three virus species.

Identification of miRNAs and associated pathways regulated by Leukemia Inhibitory Factor in trophoblastic cell lines

The paper investigates miRNA expression changes in trophoblastic cell lines under LIF stimulation and identifies associated pathways.

The landscape of the alternatively spliced transcriptome remains stable during aging across different species and tissues

This study examines alternative splicing changes during aging across species and tissues, finding that the overall transcriptomic landscape remains stable despite specific gene splicing variations.

Identification of potential microRNAs associated with Herpesvirus family based on bioinformatic analysis

This study identifies potential miRNAs in Herpesvirus family members using a bioinformatic pipeline, finding novel candidates in Epstein-Barr virus and Human Herpesvirus 7.

A miRNA catalogue and ncRNA annotation of theshort-living fish Nothobranchius furzeri

The paper presents a comprehensive miRNA and ncRNA catalogue for the short-lived fish Nothobranchius furzeri and compares it to other fish species.