Author

Ilya Skovorodkin

University of OuluORCID 0000-0003-1182-1130Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Developmental Biology· 2 Systems Biology· 1

Signature Assays, Organisms & Methods

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Organism:mouse· 3 Research Focus:cell-cell communication· 2 Approach:experimental assay· 2 Research Focus:trajectory inference· 2 Research Focus:benchmarking· 1 Assay:bulk RNA-seq· 1 Research Focus:cell type annotation· 1 Research Focus:clustering· 1

Frequent Co-Authors

Seppo Juhani VainioiD· 3 shared Aleksandra Rak‐RaszewskaiD· 1 shared Anna K. Marciniak-CzochraiD· 1 shared Franz S. SchaeferiD· 1 shared Irina B. RaykheliD· 1 shared James A. GlazieriD· 1 shared James Patrick SlukaiD· 1 shared Laura Dönges· 1 shared

Activity by Year

2019-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 25 mutual co-author links

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3 shared papersDevelopmental Biology

Seppo Juhani VainioORCID

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3 papers

Recent·Most cited

Developmental BiologybioRxivPreprintSep 17, 2026

Evidence for early kidney vasculature development by vasculogenesis and angiogenesis based on advanced in vivo chimeric model and depletion of CD31+/CD146+ intrinsic endothelial progenitors

Susanna Kaisto, Samar Ahmad, Sabrina Halmbacher…·Seppo Juhani Vainio

The paper develops a chimeric model to study kidney vasculature development, showing that CD31+/CD146+ endothelial progenitors are essential for early kidney vasculature formation.

DOI 10.64898/2026.09.15.750731

mousemultiple species

𝕏 PostBluesky

Systems BiologyMathematical BiosciencesPeer-reviewedDec 6, 2021

Computational Modelling of Cell Movements and Aggregations during Kidney Organogenesis

Pauli Tikka, Moritz Mercker, Ilya Skovorodkin…·Franz S. Schaefer

This paper uses a Cellular Potts Model to simulate cell movement and aggregation during kidney development, showing that chemoattractant secretion and cell adhesion differences drive NP cell patterning.

9 citations

mousestatistical model

𝕏 PostBluesky

Developmental BiologybioRxivPreprintAug 1, 2019

Ureteric Bud Cells Programmed from Embryonic Stem Cells Obtain Competence for Secondary Induction in the Kidney

Zenglai Tan, Aleksandra Rak‐Raszewska, Ilya Skovorodkin, Seppo Juhani Vainio

This study develops a method to generate ureteric bud progenitor cells from mouse embryonic stem cells, which can induce nephrogenesis when co-cultured with metanephric mesenchyme.

DOI 10.1101/722157

mousebulk RNA-seq

𝕏 PostBluesky