Yang Zhou

This study analyzes genomes and transcriptomes of deep-sea anemones to reveal evolutionary patterns and adaptive strategies, finding repeated gene loss and molecular innovations in deep-sea species.

Bamsnap-LRS automates batch visualization of long-read sequencing alignments, supporting genomic, transcriptomic, and haplotype-aware analyses with publication-ready figure generation.

This study identifies AMHY as the primary male sex determination gene in monotremes by analyzing its expression and function during sexual differentiation.

The paper constructs a near-complete genome assembly for the bearded dragon Pogona vitticeps and characterizes the Z sex chromosome, identifying key genes involved in sex determination.

The paper summarizes methods and lessons from assembling 16 vertebrate genomes, highlights the importance of long-read sequencing, and introduces the Vertebrate Genomes Project to generate complete reference genomes for all vertebrate species.

This study presents a nearly complete duck genome assembly, revealing conserved and convergent chromosome architectures between birds and mammals, including TAD organization and W chromosome evolution.

The paper presents a draft genome assembly of the eastern banjo frog, identifying repetitive elements and protein-coding genes, and highlights its utility for studying anuran phylogeny and genome evolution.

IRIS decodes image signals from in situ sequencing into nucleotide sequences and records quality scores and spatial information.

This study shows that BMP signaling from somatic cells induces meiosis in male germ cells by increasing Dazl expression during embryonic development.

This paper presents a de novo mammalian genome assembly for the domestic goat using long-read sequencing, short-read validation, and chromatin interaction mapping, achieving high contiguity and resolving repetitive regions.