Author

Ben Warne

University of CambridgeORCID 0000-0003-1326-0373Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Approach:statistical model· 2 Research Focus:variant calling· 2 Assay:whole-genome sequencing· 2 Research Focus:gene regulatory network inference· 1 Organism:human· 1 Organism:virus· 1

Frequent Co-Authors

M. Estée TörökiD· 2 shared Aasmund FostervoldiD· 1 shared Adam W. J. JenneyiD· 1 shared Adrian EgliiD· 1 shared Alessandra CornacchiaiD· 1 shared Alexandra ChiaveriniiD· 1 shared Aline CuénodiD· 1 shared Aminu S. JahuniD· 1 shared

Activity by Year

2024-2025 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 37 mutual co-author links

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2 shared papersEvolutionary Biology

M. Estée TörökORCID

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2 papers

Recent·Most cited

Evolutionary BiologyPLoS PathogensPeer-reviewedApr 28, 2025

Variable rates of SARS-CoV-2 evolution in chronic infections

Ewan W. Smith, William L Hamilton, Ben Warne…·Christopher J. R. Illingworth

This study analyzes within-host SARS-CoV-2 evolution in chronic infections, finding variable rates of evolution and evidence of subpopulation structure.

5 citations

viruswhole-genome sequencing

𝕏 PostBluesky

GenomicsMicrobial GenomicsPeer-reviewedOct 21, 2024

Diversity, functional classification and genotyping of SHV β-lactamases in Klebsiella pneumoniae

Kara K. Tsang, Margaret M. C. Lam, Ryan R. Wick…·KlebNET AMR Genotype-Phenotype Group

This paper reclassifies SHV β-lactamase alleles in K. pneumoniae genomes based on mutations, improving genotype-phenotype understanding and updating the Kleborate tool.

30 citations

humanwhole-genome sequencing

𝕏 PostBluesky