Vikash Pandey

This study identifies two Plasmodium virulence factors involved in lipid metabolism and disease progression by analyzing their function in vivo.

This study shows that extracellular ATP (eATP) acts as an environmental cue for bacteria, altering their transcription, metabolism, and virulence.

This study uses a CRISPR homing screen to identify essential genes for malaria transmission in mosquito stages, finding a chloroquine resistance transporter-like protein critical for oocyst development.

The paper identifies 401 sex and transmission-related gene functions in malaria parasites through genetic screens, revealing conserved fertility mechanisms across eukaryotes.

The paper identifies ten genes critical for male and female sexual development in Plasmodium berghei and reveals a regulatory cascade governing gametogenesis.

The paper integrates genome-scale metabolic modeling with transcriptomics and exometabolomics to predict bacterial metabolic responses and validate them experimentally in Pseudomonas veronii.

This paper introduces REMI, a method that integrates gene expression and metabolomic data into metabolic models to improve flux predictions and better reflect physiological states.

This paper introduces MiNEA, a framework to analyze deregulated metabolic networks in NAFLD using mouse and human data, identifying key metabolic tasks and regulators.

TEX-FBA integrates gene expression, thermodynamics, and metabolomics data into genome-scale metabolic models to reduce flux solution space and improve consistency with experimental data.