Charlotte West

This paper introduces a convolutional neural network to detect interspecific positive selection, achieving higher accuracy and robustness to alignment errors compared to traditional statistical methods.

The paper shows extreme genome scrambling in cryptic Oikopleura dioica species, revealing high rates of gene order rearrangements and insights into synteny conservation mechanisms.

The paper presents a chromosome-scale genome assembly of Oikopleura dioica using Nanopore, Illumina, and Hi-C data, revealing chromosomal structure and genomic features.