Author

Andrew W. Liu

Okinawa Institute of Science and Technology Graduate UniversityORCID 0000-0003-2355-5888Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Genomics· 3

Signature Assays, Organisms & Methods

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Assay:whole-genome sequencing· 3 Approach:experimental assay· 2 Organism:non-human primate· 2 Organism:bacteria (other)· 1 Research Focus:gene regulatory network inference· 1 Research Focus:genome assembly· 1 Organism:human· 1 Organism:plant (other)· 1

Frequent Co-Authors

Charles PlessyiD· 3 shared Nicholas M. LuscombeiD· 3 shared Aki MasunagaiD· 2 shared Aleksandra BlizninaiD· 2 shared Charlotte WestiD· 2 shared Michael J. MansfieldiD· 2 shared Yongkai TaniD· 2 shared Alejandro Villar‐BrionesiD· 1 shared

Activity by Year

2021-2024 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 38 mutual co-author links

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3 shared papersGenomics

Charles PlessyORCID

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3 papers

Recent·Most cited

GenomicsGenome ResearchPeer-reviewedApr 15, 2024

Extreme genome scrambling in cryptic Oikopleura dioica species

Charles Plessy, Michael J. Mansfield, Aleksandra Bliznina…·Nicholas M. Luscombe

The paper shows extreme genome scrambling in cryptic Oikopleura dioica species, revealing high rates of gene order rearrangements and insights into synteny conservation mechanisms.

3 citations

non-human primatewhole-genome sequencing

𝕏 PostBluesky

GenomicsF1000ResearchPeer-reviewedFeb 28, 2022

Automated phenol-chloroform extraction of high molecular weight genomic DNA for use in long-read single-molecule sequencing.

Andrew W. Liu, Alejandro Villar‐Briones, Nicholas M. Luscombe, Charles Plessy

This paper describes an automated phenol-chloroform DNA extraction protocol using a robot, achieving high molecular weight DNA suitable for long-read sequencing.

27 citations

humanbacteria (other)

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GenomicsBMC GenomicsPeer-reviewedMar 29, 2021

Telomere-to-telomere assembly of the genome of an individual Oikopleura dioica from Okinawa using Nanopore-based sequencing

Aleksandra Bliznina, Aki Masunaga, Michael J. Mansfield…·Nicholas M. Luscombe

The paper presents a chromosome-scale genome assembly of Oikopleura dioica using Nanopore, Illumina, and Hi-C data, revealing chromosomal structure and genomic features.

33 citations

non-human primatewhole-genome sequencing

𝕏 PostBluesky