Yu-Ping Hong

Evaluation of Oxford Nanopore Sequencing for Antimicrobial Resistance Surveillance in Salmonella: Comparison with Phenotypic Antimicrobial Susceptibility in a Large-Scale Study

This study evaluates Oxford Nanopore sequencing for AMR detection in Salmonella, comparing it to phenotypic testing and finding high concordance but notable discrepancies in resistance classification.

Adaptive sampling-based enrichment enables genome reconstruction of intracellular symbionts despite host background and reference divergence

This paper demonstrates that adaptive sampling-based sequencing enables efficient genome reconstruction of intracellular symbionts from host-dominated samples, achieving high completeness and revealing structural divergence from reference genomes.