Author

Colin Ophus

Lawrence Berkeley National LaboratoryORCID 0000-0003-2348-8558Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Biophysics· 2

Signature Assays, Organisms & Methods

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Research Focus:benchmarking· 1 Assay:cryo-EM· 1 Approach:deep learning· 1 Assay:electronic health records· 1 Approach:experimental assay· 1 Assay:multiome· 1 Research Focus:protein structure prediction· 1 Approach:statistical model· 1

Frequent Co-Authors

Adam FrostiD· 1 shared Alexander G. MyasnikoviD· 1 shared Andrew M. NataleiD· 1 shared Arshad Mohammed· 1 shared Berk KüçükoğluiD· 1 shared Carsten SachseiD· 1 shared Frank R. MossiD· 1 shared Georgios VarnavidesiD· 1 shared

Activity by Year

2024-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 21 mutual co-author links

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1 shared paperBiophysics

Adam FrostORCID

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2 papers

Recent·Most cited

BiophysicsBiophysical JournalPeer-reviewedFeb 17, 2026

Comparing Multislice Projections of MD Simulations with CryoEM Exposes Structural Prediction Errors

Arshad Mohammed, James Lincoff, Andrew M. Natale…·Frank R. Moss

This paper compares multislice projections of MD simulations with cryoEM to identify structural prediction errors in coarse-grained and all-atom MD simulations of membranes.

1 citation

cryo-EMmultiome

𝕏 PostBluesky

BiophysicsNature CommunicationsPeer-reviewedSep 14, 2024

Low-dose cryo-electron ptychography of proteins at sub-nanometer resolution

Berk Küçükoğlu, Inayathulla Mohammed, Ricardo Guerrero-Ferreira…·Henning Stahlberg

This paper applies low-dose cryo-EM and 4D-STEM ptychography to achieve sub-nanometer resolution 3D reconstructions of frozen hydrated proteins.

98 citationstop 1%

electronic health recordsexperimental assay

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