Author

Tsukasa Ishiwata

University Health NetworkORCID 0000-0003-2369-2698Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Research Focus:cell-cell communication· 2 Organism:human· 2 Assay:bulk RNA-seq· 1 Research Focus:cell type annotation· 1 Research Focus:clustering· 1 Research Focus:differential expression· 1 Approach:experimental assay· 1 Research Focus:gene regulatory network inference· 1

Frequent Co-Authors

Ankita BurmaniD· 2 shared S. JuvetiD· 2 shared Tereza MartinuiD· 2 shared Aaron WongiD· 1 shared Allen DuongiD· 1 shared Boris HinziD· 1 shared Gavin W. WilsoniD· 1 shared Grégory BerraiD· 1 shared

Activity by Year

2026-2026 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 33 mutual co-author links

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2 shared papersImmunology

Ankita BurmanORCID

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2 papers

Recent·Most cited

ImmunologybioRxivPreprintSep 9, 2026

Identification and characterization of inflammatory LILR and fibrotic SPP1 macrophages in chronic lung allograft dysfunction

Allen Duong, Sajad Moshkelgosha, Aaron Wong…·Tereza Martinu

This study identifies two distinct macrophage populations in chronic lung allograft dysfunction using single-cell RNA sequencing and characterizes their functional roles in inflammation and fibrosis.

DOI 10.64898/2026.09.04.749490

humanscRNA-seq

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BioinformaticsbioRxivPreprintMay 28, 2026

Distinct fibrotic, epithelial and immune transcriptomic programs in phenotypes of chronic lung allograft dysfunction

Tsukasa Ishiwata, Grégory Berra, Jonathan Allen…·Tereza Martinu

The paper identifies distinct transcriptomic signatures in chronic lung allograft dysfunction phenotypes using bulk RNA sequencing and non-negative matrix factorization.

1 citation

humanbulk RNA-seq

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