Velma T. E. Aho

This study swaps rumen contents between low- and high-methane-yielding cows and finds that methane production remains tied to the host, not the microbiome, with asymmetric microbiome reconstitution observed.

The paper identifies functional differences in the rumen microbiome of lactating cows with varying methane intensity, linking specific metabolic pathways to methane production efficiency.

OmniCorr is an R package that clusters and visualizes multi-omics data to identify putative host-microbiota interactions across different biological systems.

The paper uses integrated multi-omics to identify functional gut microbiome alterations in Parkinson's disease and prodromal stages, finding changes in metabolites and microbial gene transcripts.

CompareM2 is a pipeline that compares microbial genomes to generate reports on quality, annotation, taxonomy, function, and phylogeny.

The paper identifies two rumen community types linked to protozoal populations and shows their impact on microbial interactions and metabolite profiles.

This study shows that dietary fibre deprivation and bacterial curli exposure worsen PD-like symptoms in mice overexpressing human alpha-synuclein.

The paper investigates associations between gut microbiome composition and risk/prodromal markers of Parkinson's disease in elderly participants.