Author

Hiromichi Ebi

Aichi Cancer CenterORCID 0000-0003-3155-7576Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Organism:human· 3 Assay:spatial transcriptomics· 2 Approach:statistical model· 2 Research Focus:benchmarking· 1 Research Focus:cancer & tumor microenvironment· 1 Research Focus:cell type annotation· 1 Research Focus:differential expression· 1 Assay:DNA methylation· 1

Frequent Co-Authors

Afroditi SotiriouiD· 1 shared Akihito InokoiD· 1 shared Alexandros C. DimopoulosiD· 1 shared Ana BanitoiD· 1 shared Andrew Stewart PoklepoviciD· 1 shared Angeliki M. Stamatouli· 1 shared Anthony C. FaberiD· 1 shared Asha JoseiD· 1 shared

Activity by Year

2020-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 24 mutual co-author links

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1 shared paperCancer Biology

Afroditi SotiriouORCID

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3 papers

Recent·Most cited

Cancer BiologybioRxivPreprintOct 22, 2026

SPATNIC enables H&E-grounded cancer-cell identification across spatial and single-cell transcriptomic modalities in colorectal cancer

Shunsuke A. Sakai, Ryosuke Nomura, Masaki Ohira…·Riu Yamashita

SPATNIC is a variational autoencoder that identifies cancer cells from spatial and single-cell transcriptomic data in colorectal cancer, outperforming existing tools and identifying a rare cancer stem cell population.

DOI 10.64898/2026.10.21.760612

humanspatial transcriptomics

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Cancer BiologyNature CommunicationsPeer-reviewedNov 5, 2025

Targeting of SUMOylation leads to cBAF complex stabilization and disruption of the SS18::SSX transcriptome in Synovial Sarcoma

Konstantinos V. Floros, Carter K. Fairchild, Jinxiu Li…·Anthony C. Faber

This study shows that inhibiting SUMOylation with TAK-981 stabilizes cBAF complexes and disrupts the SS18::SSX-driven transcriptome in synovial sarcoma, leading to tumor inhibition.

13 citations

humanmouse

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GeneticsNature CommunicationsPeer-reviewedJun 24, 2020

Genome-wide association meta-analysis identifies novel GP2 gene risk variants for pancreatic cancer in the Japanese population

Yingsong Lin, Masahiro Nakatochi, Yasuyuki Hosono…·Keitaro Matsuo

61 citations

humanGWAS summary statistics

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