Author

Pierre Amato

Centre National de la Recherche ScientifiqueORCID 0000-0003-3168-0398Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 1 Ecology· 1

Signature Assays, Organisms & Methods

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Assay:metagenomics· 2 Research Focus:benchmarking· 1 Research Focus:cell signaling & trafficking· 1 Approach:comparative / phylogenetic analysis· 1 Research Focus:database / resource· 1 Research Focus:ecology & biodiversity· 1 Approach:experimental assay· 1 Research Focus:host-pathogen & immune response· 1

Frequent Co-Authors

Bérénice BatutiD· 2 shared Engy Mohamed Taha NasriD· 2 shared Raphaëlle PéguilhaniD· 2 shared Andrew StubbsiD· 1 shared Anshu BhardwajiD· 1 shared Ashwani Kumar· 1 shared Asime ObaiD· 1 shared Barbara ErvensiD· 1 shared

Activity by Year

2023-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 39 mutual co-author links

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2 shared papersBioinformatics

Bérénice BatutORCID

Mutual co-authors in cluster

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2 papers

Recent·Most cited

BioinformaticsCommunications BiologyPeer-reviewedOct 29, 2026

Microbiology Galaxy Lab: The first community-driven gateway for reproducible and FAIR analysis of microbial data

Engy Mohamed Taha Nasr, Nikolaos Pechlivanis, Nikolaos Strepis…·Bérénice Batut

The paper introduces the Microbiology Galaxy Lab, a community-driven platform for reproducible and FAIR microbial data analysis, offering tools for various omics data types and use cases.

5 citationstop 1%

metagenomicsexperimental assay

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EcologybioRxivPreprintDec 14, 2023

Clouds, oases for airborne microbes - Differential metagenomics/ metatranscriptomics analyses of cloudy and clear atmospheric situations

Raphaëlle Péguilhan, Florent Rossi, Muriel Joly…·Pierre Amato

The paper compares metagenomics/metatranscriptomics of cloudy and clear atmospheric conditions, showing clouds activate microbial metabolic functions similar to soil rewetting.

2 citations

metagenomicsmetabolomics

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