Author

Yuting Wu

The University of Texas at AustinORCID 0000-0003-3196-5916Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioengineering· 2 Biophysics· 1

Signature Assays, Organisms & Methods

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Approach:deep learning· 2 Assay:DNA methylation· 2 Approach:statistical model· 2 Research Focus:cell type annotation· 1 Research Focus:drug response / drug discovery· 1 Approach:experimental assay· 1 Assay:long-read sequencing· 1 Research Focus:protein folding & dynamics· 1

Frequent Co-Authors

Anh-Thu Nguyen· 3 shared Hsin‐Chih YehiD· 3 shared Pengyu Y. ReniD· 3 shared Yi LuiD· 3 shared Yu-An Kuo· 3 shared Yujie HeiD· 3 shared Zhenglin Yang· 3 shared Chengde MaoiD· 2 shared

Activity by Year

2026-2026 · peak 3/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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3 shared papersBioengineering

Anh-Thu Nguyen

Mutual co-authors in cluster

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3 papers

Recent·Most cited

BioengineeringACS NanoPeer-reviewedAug 14, 2026

A High-Throughput Platform for Rapid Adaptation of DNA Aptamers to SARS-CoV-2 Evolution

Yujie He, Zhenglin Yang, Yu-An Kuo…·Hsin‐Chih Yeh

This paper develops a high-throughput platform to rapidly adapt DNA aptamers against evolving SARS-CoV-2 variants, identifying mutants with improved binding affinity and specificity.

DOI 10.1021/acsnano.6c08330

virusDNA methylation

𝕏 PostBluesky

BiophysicsACS SensorsPeer-reviewedMay 11, 2026

Fluorogenic Aptamer Optimizations on a Massively Parallel Sequencing Platform

Yu-An Kuo, Y.-I. Chen, Naseem Siraj…·Hsin‐Chih Yeh

This paper optimizes a DNA-based fluorogenic aptamer (D-FAP) using a screening-and-simulation pipeline on a repurposed sequencing platform, achieving improved fluorescence properties.

2 citations

DNA methylationlong-read sequencing

𝕏 PostBluesky

BioengineeringbioRxivPreprintApr 15, 2026

Lifetime-based multiplexed detection of viral RNA using fluorogenic aptamers

Y R Chen, Yu-An Kuo, Yujie He…·Hsin‐Chih Yeh

This paper introduces a fluorescence-lifetime-based multiplexed detection strategy using fluorogenic aptamers to distinguish viral RNA targets with minimal cross-reactivity and spectral overlap.

2 citations

proteomicsdeep learning

𝕏 PostBluesky