Zulema Udaondo

This study identifies LuxR874 as a bacterial regulator that modulates plant developmental reprogramming during rhizoremediation by altering host gene expression and physiological responses.

This study shows that Turnip mosaic virus selectively filters bacterial root microbiomes in Arabidopsis thaliana, with genotype-specific effects on community composition and network structure.

This study examines how diesel contamination affects bacterial populations in soil during rhizoremediation with clover and ryegrass, finding that clover accelerates diesel degradation and mitigates bacterial diversity loss.

The paper develops three fungal acid phosphatase profiles to identify uncharacterized proteins, showing high sensitivity and specificity across diverse fungal taxa.

GRUMPS cleans genomic datasets by identifying and removing low-quality and misidentified genomes, enabling accurate analysis of bacterial population structures.

The paper investigates the role of insertion sequences in antibiotic resistance gene mobilization and phenotype modification in Enterococcus isolates from a patient with prolonged bacteremia.

This study analyzes over 100,000 E. coli genomes to identify 14 phylogroups, revealing population structure and genomic adaptations in virulence and antibiotic resistance.

The paper applies unsupervised clustering to analyze population structure in thousands of bacterial genomes, showing improved identification of mixed genomes and inter-related groups.