Author
Centre National de la Recherche ScientifiqueORCID 0000-0003-3749-7981Unclaimed ORCID profile · follow to get notified of new preprints
5 papers
Recent·Most cited
Adrien Le Meur, Ricardo C. Rodŕıguez de la Vega, Rima Zein-Eddine, Guislaine Refrégier
The paper benchmarks variant calling in Mycobacterium tuberculosis using realistic in silico genomes, showing that current methods miss variants and are biased.
Rima Zein-Eddine, Adrien Le Meur, Stéphane Skouloubris…·Hannu Myllykallio
The paper identifies 18 novel SNPs in DNA repair genes linked to drug resistance in Mtb using genome-wide analysis of 53,589 whole-genomes.
Muhammed Rabiu Sahal, Gaëtan Senelle, Kévin La…·Christophe Guyeux
This study improves understanding of Mycobacterium tuberculosis lineage 5 diversity and phylogeography using new genomic data and a novel bioinformatics pipeline.
Christophe Guyeux, Gaëtan Senelle, Guislaine Refrégier…·Christophe Sola
The paper identifies a new ancestral L2 sublineage of Mycobacterium tuberculosis in Japan, linking historical tuberculosis outbreaks through genetic analysis.
Christophe Guyeux, Christophe Sola, Guislaine Refrégier
The paper reconstructs CRISPR loci in Mycobacterium tuberculosis complex using short reads, revealing errors in existing reconstructions and new structural features.