Author

Nicole Adell Doudican

NYU Langone HealthORCID 0000-0003-3827-9644Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Organism:human· 2 Assay:scRNA-seq· 2 Approach:statistical model· 2 Research Focus:batch correction / integration· 1 Research Focus:cell type annotation· 1 Research Focus:clustering· 1 Research Focus:differential expression· 1 Research Focus:dimensionality reduction· 1

Frequent Co-Authors

John A. CarucciiD· 2 shared Adriana HeguyiD· 1 shared Alireza Khodadadi‐JamayraniD· 1 shared Aristotelis TsirigosiD· 1 shared Azucena V. Rocha· 1 shared Boris ReizisiD· 1 shared David FenyöiD· 1 shared Efiyenia Ismini KaparosiD· 1 shared

Activity by Year

2020-2023 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 25 mutual co-author links

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2 shared papersBioinformatics

John A. CarucciORCID

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2 papers

Recent·Most cited

BioinformaticsNucleic Acids ResearchPeer-reviewedJan 17, 2023

LINE-1 Retrotransposon expression in cancerous, epithelial and neuronal cells revealed by 5'-single cell RNA-Seq

Wilson McKerrow, Larisa Kagermazova, Nicole Adell Doudican…·David Fenyö

The paper develops a method to measure LINE-1 retrotransposon expression in single cells and identifies its presence in epithelial and neuronal cells, with age-related increases.

30 citationstop 5%

humanmouse

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BioinformaticsbioRxivPreprintMar 31, 2020

iCellR: Combined Coverage Correction and Principal Component Alignment for Batch Alignment in Single-Cell Sequencing Analysis

Alireza Khodadadi‐Jamayran, Joseph N. Pucella, Hua Zhou…·Aristotelis Tsirigos

The paper introduces two batch alignment methods for single-cell RNA sequencing to address drop-out issues and improve clustering accuracy across batches.

12 citations

humanscRNA-seq

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