Author

Cyril Denby Wilkes

Centre National de la Recherche ScientifiqueORCID 0000-0003-3932-5294Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 2 Genomics· 2

Signature Assays, Organisms & Methods

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Organism:yeast· 4 Assay:DNA methylation· 3 Research Focus:gene regulatory network inference· 3 Approach:statistical model· 3 Assay:ChIP-seq· 2 Research Focus:differential expression· 2 Research Focus:cell type annotation· 1 Approach:experimental assay· 1

Frequent Co-Authors

Arach GoldariD· 4 shared Julie SoutourinaiD· 4 shared Leo ZeitleriD· 3 shared Adriana AlbertiiD· 2 shared Kévin M. AndréiD· 2 shared Nathalie Giordanengo Aiach· 2 shared Diyavarshini GopauliD· 1 shared Elizaveta NovikovaiD· 1 shared

Activity by Year

2022-2024 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 33 mutual co-author links

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4 shared papersBioinformatics

Arach GoldarORCID

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4 papers

Recent·Most cited

BioinformaticsPLoS Computational BiologyPeer-reviewedJan 24, 2024

A Genome-Wide Comprehensive Analysis of Nucleosome Positioning in Yeast

Leo Zeitler, Kévin M. André, Adriana Alberti…·Arach Goldar

This study uses functional Principal Component Analysis to analyze nucleosome positioning in yeast, revealing roles for RSC and Chd1 in gene body and upstream nucleosome organization.

5 citations

yeastChIP-seq

𝕏 PostBluesky

GenomicsCell ReportsPeer-reviewedMay 1, 2023

Functional interplay between Mediator and RSC chromatin remodeling complex controls nucleosome-depleted region maintenance at promoters

Kévin M. André, Nathalie Giordanengo Aiach, Veronica Martinez-Fernandez…·Julie Soutourina

The paper shows Mediator and RSC chromatin remodeling complex interact to maintain nucleosome-depleted regions at promoters in yeast.

10 citations

yeastChIP-seq

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BioinformaticsPLoS Computational BiologyPeer-reviewedSep 12, 2022

A Quantitative Modelling Approach for DNA Repair on a Population Scale

Leo Zeitler, Cyril Denby Wilkes, Arach Goldar, Julie Soutourina

The paper develops a quantitative modeling framework to analyze DNA repair kinetics in yeast, finding gene size correlates with repair rates.

5 citations

yeastDNA methylation

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GenomicsGenome ResearchPeer-reviewedAug 1, 2022

Genome-wide distribution of Rad26 and Rad1-Rad10 reveals their relationship with Mediator and RNA polymerase II

Diyavarshini Gopaul, Cyril Denby Wilkes, Arach Goldar…·Julie Soutourina

The paper investigates the genome-wide distribution of Rad26 and Rad1-Rad10 in yeast, showing their association with Mediator and Pol II, and their distinct regulatory roles in transcription and DNA repair.

2 citations

yeastDNA methylation

𝕏 PostBluesky