Markus Rudin

The paper introduces MR-μScope, a system combining MRI and miniaturized microscopy to study neurovascular coupling across scales, showing vessel-size-dependent responses to stimuli.

The paper investigates how manipulating D1 medium spiny neurons affects BOLD dynamics in connected brain regions using resting-state fMRI.

This paper demonstrates the use of small-angle X-ray scattering (SAXS) to detect myelinated axon crossings in multiple species, providing a ground truth for validating other imaging methods.

This paper demonstrates a 3D visualization method for amyloid-beta deposits in Alzheimer's mouse models using MRI and FMT, showing improved depth resolution compared to 2D methods.

The paper presents a whole-brain opto-fMRI map of VTA dopaminergic activation in mice, showing consistency with structural projections but with some deviations.

This paper introduces an optimized registration workflow and standard geometric space for small animal MRI, improving consistency and data comparability across subjects and sessions.

This study examines how psilocybin affects functional connectivity in mice, revealing distinct changes in serotonin and dopamine-related networks.

This paper introduces a longitudinal opto-fMRI assay to study SSRI effects on the mouse serotonergic system, revealing a brainstem neurophenotype and no persistent effects after treatment cessation.

The paper shows that increasing the excitation-to-inhibition ratio in mouse cortical circuits using chemogenetics reduces long-range connectivity and can be detected via fMRI-based classifiers.

The paper introduces vMSOT with AOI987 to quantify Aβ deposition in AD mouse models, revealing strain-specific patterns.

The paper presents an open-source workflow to convert small animal MRI data from ParaVision to BIDS format, improving data standardization and compatibility.

This study identifies reproducible resting-state networks in the mouse brain across multiple centers using standardized rsfMRI analysis.