Author

Justin Patrick Ellis

Colorado State UniversityORCID 0009-0004-2531-3481Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioengineering· 1 Genetics· 1

Signature Assays, Organisms & Methods

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Organism:C. elegans· 1 Research Focus:cell type annotation· 1 Research Focus:clustering· 1 Assay:imaging· 1 Approach:microscopy & imaging analysis· 1 Assay:scRNA-seq· 1 Approach:statistical model· 1

Frequent Co-Authors

Alejandro ChaveziD· 1 shared Ambika BasuiD· 1 shared Andrew J. UlmeriD· 1 shared Andrew MooreiD· 1 shared Anthony ApodacaiD· 1 shared Christian ArthuriD· 1 shared Daniel Edward MilkieiD· 1 shared Erin Osborne NishimuraiD· 1 shared

Activity by Year

2026-2026 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 21 mutual co-author links

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1 shared paperBioengineering

Alejandro ChavezORCID

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2 papers

Recent·Most cited

BioengineeringbioRxivPreprintSep 16, 2026

A custom two-in-one HIST and line-scanning confocal excitation module

Christian Arthur, Daniel Edward Milkie, Andrew J. Ulmer…·Wesley R. Legant

This paper introduces a reconfigurable microscopy module that combines HIST and line-scanning confocal techniques for versatile fluorescence imaging.

DOI 10.64898/2026.09.14.751507

imagingmicroscopy & imaging analysis

𝕏 PostBluesky

GeneticsbioRxivPreprintMay 22, 2026

Transcriptomic profiling of the embryonic C. elegans intestine with single-cell resolution

Jessica L. Hill, Justin Patrick Ellis, Robert T. P. Williams…·Erin Osborne Nishimura

This study uses single-cell RNA sequencing to analyze the embryonic C. elegans intestine, identifying 13 cell clusters and their developmental and spatial characteristics.

DOI 10.64898/2026.05.20.726538

C. elegansscRNA-seq

𝕏 PostBluesky