Author

Yue Wu

Centre National de la Recherche ScientifiqueORCID 0009-0004-6801-9899Unclaimed ORCID profile · follow to get notified of new preprints

Additional preprints under this name without ORCID

Yue Wu5 papers · Chinese Academy of Sciences

Biology Disciplines

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Genomics· 2 Bioinformatics· 1

Signature Assays, Organisms & Methods

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Assay:ChIP-seq· 2 Research Focus:database / resource· 2 Research Focus:differential expression· 2 Assay:DNA methylation· 2 Research Focus:gene regulatory network inference· 2 Approach:statistical model· 2 Assay:bulk RNA-seq· 1 Organism:Drosophila· 1

Frequent Co-Authors

Leı̈la TirichineiD· 3 shared Eric ManirakizaiD· 2 shared Timothée ChaumieriD· 2 shared Agnès GroisillieriD· 1 shared Alaguraj VeluchamyiD· 1 shared Bérangère LombardiD· 1 shared Bruno JesusiD· 1 shared Damarys LoewiD· 1 shared

Activity by Year

2021-2024 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 24 mutual co-author links

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3 shared papersGenomics

Leı̈la TirichineORCID

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3 papers

Recent·Most cited

Genome wide assessment of genetic diversity and transcript variations in 17 accessions of the model diatom Phaeodactylum tricornutum

Timothée Chaumier, Feng Yang, Eric Manirakiza, Ouardia Aït-Mohamed, Yue Wu, Udita Chandola, Bruno Jesus, Gwenaël Piganeau, Agnès Groisillier, Leı̈la Tirichine

The paper assesses genetic and transcriptomic diversity in 17 Phaeodactylum tricornutum accessions, revealing increased genetic diversity and novel clades, while showing no link between sampling year and diversity loss.

ISME Communications · Jan 1, 2024Peer-reviewedGenomics

PhaeoEpiView: An epigenome browser of the newly assembled genome of the model diatom Phaeodactylum tricornutum

Yue Wu, Timothée Chaumier, Eric Manirakiza, Alaguraj Veluchamy, Leı̈la Tirichine

The paper introduces PhaeoEpiView, an epigenome browser for the updated genome of Phaeodactylum tricornutum, integrating DNA methylation and histone modifications for better biological interpretation.

Scientific Reports · May 23, 2023Peer-reviewedBioinformatics

Histone modifications during the life cycle of the brown alga Ectocarpus

Simon Bourdareau, Leı̈la Tirichine, Bérangère Lombard, Damarys Loew, Delphine Scornet, Yue Wu, Susana M. Coelho, Jeremy Mark Cock

The paper identifies 47 histone PTMs in the brown alga Ectocarpus, including a novel mark, and shows their stable patterns through the life cycle and association with gene expression.

Genome biology · Jan 4, 2021Peer-reviewedGenomics