Alaguraj Veluchamy

The paper introduces BOUQUET, an algorithm that identifies 3D-super-enhancers as protein-rich cis-regulatory communities associated with co-activator condensates in mammalian cells.

QuartPlotR provides a visualization tool for multidimensional genomic datasets, enabling integration and analysis of sequence and annotation features across different genomic contexts.

The paper introduces PhaeoEpiView, an epigenome browser for the updated genome of Phaeodactylum tricornutum, integrating DNA methylation and histone modifications for better biological interpretation.

The paper uses whole genome sequencing of ten Phaeodactylum tricornutum accessions to reveal genetic polymorphism, structure, and functional diversity across geographic and temporal scales.