Author

Ruth Raichur

Broad InstituteORCID 0009-0005-9107-7357Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Organism:mouse· 3 Assay:spatial transcriptomics· 3 Research Focus:cell type annotation· 2 Approach:experimental assay· 2 Research Focus:spatial domain detection· 2 Assay:ATAC-seq· 1 Research Focus:cell-cell communication· 1 Assay:CITE-seq· 1

Frequent Co-Authors

Fei CheniD· 3 shared Giovanni J. MarreroiD· 2 shared Sophia LiuiD· 2 shared Vipin KumariD· 2 shared Alex K. ShalekiD· 1 shared Alison KochersbergeriD· 1 shared Andrew J. C. RusselliD· 1 shared Andrew Minagar· 1 shared

Activity by Year

2023-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 30 mutual co-author links

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3 shared papersGenomics

Fei ChenORCID

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3 papers

Recent·Most cited

GenomicsNature AgingPeer-reviewedJun 17, 2026

Aging disrupts spatiotemporal coordination in the cycling murine ovary

Tammy C. T. Lan, Alison Kochersberger, Ruth Raichur…·Hattie Chung

This study uses spatial transcriptomics to show that aging disrupts spatial and temporal coordination of folliculogenesis in mouse ovaries, leading to tissue disorganization and reproductive decline.

13 citationstop 1%

mousespatial transcriptomics

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ImmunologybioRxivPreprintJun 28, 2025

Tissue architecture dynamics underlying immune development and decline in the thymus

Sophia Liu, Mirco Friedrich, Ruth Raichur…·Fei Chen

This study uses spatial transcriptomics and TCR sequencing in mice to analyze thymus changes across lifespan, revealing structural and transcriptional alterations linked to immune decline.

2 citations

mousespatial transcriptomics

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GenomicsbioRxivPreprintApr 1, 2023

Slide-tags: scalable, single-nucleus barcoding for multi-modal spatial genomics

Andrew J. C. Russell, Jackson A. Weir, Naeem M. Nadaf…·Fei Chen

Slide-tags enables spatial localization of single nuclei for multi-modal spatial genomics, achieving high-resolution mapping and multiomic profiling in various tissues.

16 citations

mousehuman

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