Author

Matthew H. Thomas

Cleveland ClinicORCID 0009-0005-9785-9413Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Approach:deep learning· 2 Research Focus:drug response / drug discovery· 2 Organism:mouse· 2 Assay:proteomics· 2 Research Focus:benchmarking· 1 Research Focus:host-pathogen & immune response· 1 Approach:statistical model· 1

Frequent Co-Authors

James D. AlleniD· 2 shared Ted M. RossiD· 2 shared Amanda LynchiD· 1 shared Camila Carla da Silva CaetanoiD· 1 shared Giuseppe Andrea SauttoiD· 1 shared Ivelin S. GeorgieviD· 1 shared Jessica M. MedinaiD· 1 shared Victoria HowardiD· 1 shared

Activity by Year

2026-2026 · peak 2/yr

Co-Author Collaboration Network

8 top collaborators · 19 mutual co-author links

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2 shared papersImmunology

James D. AllenORCID

Mutual co-authors in cluster

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2 papers

Recent·Most cited

ImmunologybioRxivPreprintSep 10, 2026

Computationally Optimized H1 and H3 Hemagglutinin Messenger RNA Vaccines Confer Broad Protective Immunity Against Modern Influenza Viruses

James D. Allen, Jessica M. Medina, Camila Carla da Silva Caetano…·Ted M. Ross

This study develops COBRA HA mRNA vaccines that induce broad immunity against diverse influenza strains in mice.

DOI 10.64898/2026.09.04.749505

mouseproteomics

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ImmunologybioRxivPreprintAug 31, 2026

Design and characterization of broadly protective influenza A(H3N2) vaccine candidates using protein language models

Victoria Howard, James D. Allen, Matthew H. Thomas…·Ivelin S. Georgiev

This study designs influenza A(H3N2) vaccine candidates using protein language models and machine learning, showing two candidates provide broad protection against current and drifted strains in mice.

DOI 10.64898/2026.08.26.747087

mouseproteomics

𝕏 PostBluesky