Author

Ewout Knibbe

Delft University of TechnologyORCID 0009-0007-0835-1285Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Systems Biology· 2

Signature Assays, Organisms & Methods

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Approach:experimental assay· 2 Organism:yeast· 2 Research Focus:benchmarking· 1 Assay:proteomics· 1 Approach:statistical model· 1

Frequent Co-Authors

Martin PabstiD· 2 shared Maxime den RidderiD· 2 shared Pascale A. S. Daran-LapujadeiD· 2 shared Ana Maria Almonacid SuareziD· 1 shared Barbara M. BakkeriD· 1 shared Francine J. Boonekamp· 1 shared Jean-Marc G DaraniD· 1 shared Justina Clarinda WoltersiD· 1 shared

Activity by Year

2021-2022 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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2 shared papersSystems Biology

Martin PabstORCID

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2 papers

Recent·Most cited

Systems BiologyJournal of ProteomicsPeer-reviewedMar 26, 2022

A systematic evaluation of yeast sample preparation protocols for spectral identifications, proteome coverage and post-isolation modifications

Maxime den Ridder, Ewout Knibbe, Wiebeke van den Brandeler…·Martin Pabst

This study evaluates yeast sample preparation protocols for proteomics, finding that urea with filter-aided or in-solution digestion provides best coverage, while solvents like acetone introduce artefacts.

15 citations

yeastproteomics

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Systems BiologybioRxivPreprintSep 28, 2021

A yeast with muscle does not run faster: full humanization of the glycolytic pathway in Saccharomyces cerevisiae

Francine J. Boonekamp, Ewout Knibbe, Marcel A. Vieira‐Lara…·Pascale A. S. Daran-Lapujade

This study successfully humanizes the entire glycolytic pathway in yeast, revealing conserved functions and context-dependent responses.

DOI 10.1101/2021.09.28.462164

yeastexperimental assay

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