Author

Andrew J. Mocle

University of TorontoORCID 0009-0007-5146-2730Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Approach:experimental assay· 2 Assay:imaging· 2 Research Focus:benchmarking· 1 Approach:machine learning (classical)· 1 Organism:mouse· 1

Frequent Co-Authors

Adam I. RamsaraniD· 2 shared Alexander D. Jacob· 2 shared Lina M. TraniD· 2 shared Paul W. FranklandiD· 2 shared Sheena A. JosselyniD· 2 shared Chen Yan· 1 shared

Activity by Year

2018-2020 · peak 1/yr

Co-Author Collaboration Network

6 top collaborators · 15 mutual co-author links

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2 shared papersNeuroscience

Adam I. RamsaranORCID

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2 papers

Recent·Most cited

NeuroscienceFrontiers in Neural CircuitsPeer-reviewedJul 15, 2020

Automated curation of CNMF-E-extracted ROI spatial footprints and calcium traces using open-source AutoML tools

Lina M. Tran, Andrew J. Mocle, Adam I. Ramsaran…·Sheena A. Josselyn

The paper introduces an automated curation method for CNMF-E-extracted ROIs and calcium traces using TPOT and AutoSklearn, achieving an F1 score > 92% on a test dataset.

19 citations

imagingmachine learning (classical)

𝕏 PostBluesky

NeuroscienceCurrent Protocols in NeurosciencePeer-reviewedJun 26, 2018

A compact head-mounted endoscope for in vivo calcium imaging in freely-behaving mice

Alexander D. Jacob, Adam I. Ramsaran, Andrew J. Mocle…·Sheena A. Josselyn

This paper describes the construction and use of a low-cost, open-source head-mounted endoscope for in vivo calcium imaging in freely-behaving mice.

82 citationstop 4%

mouseimaging

𝕏 PostBluesky