Author

Fabienne Thelen

Institute of Bioinformatics and Systems Biology, Justus Liebig University Giessen, Giessen, Germany;ORCID 0009-0008-9890-6228Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Cell Biology· 1 Molecular Biology· 1

Signature Assays, Organisms & Methods

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Approach:experimental assay· 2 Assay:proteomics· 2 Organism:yeast· 2 Research Focus:benchmarking· 1 Research Focus:cell signaling & trafficking· 1 Research Focus:database / resource· 1 Research Focus:protein structure prediction· 1 Research Focus:software / tool· 1

Frequent Co-Authors

Cornelia KilchertiD· 2 shared Günter LochnitiD· 2 shared Johanna Franziska SeidleriD· 2 shared Katja SträßeriD· 2 shared Nadine Bianca WäberiD· 2 shared Thomas TimmiD· 2 shared Alexander GoesmanniD· 1 shared Jan WeberiD· 1 shared

Activity by Year

2024-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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2 shared papersCell Biology

Cornelia KilchertORCID

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2 papers

Recent·Most cited

Cell BiologybioRxivPreprintNov 6, 2026

Proteome-wide profiling reveals compartment-specific RNA buffering of protein aggregation during stress

Johanna Franziska Seidler, Fabienne Thelen, Nadine Bianca Wäber…·Cornelia Kilchert

The paper uses R-DeeP to show stress-induced compartment-specific RNA buffering of protein aggregation in yeast, with nuclear RNA retention protecting nuclear proteins from aggregation.

DOI 10.64898/2026.11.04.764228

yeastproteomics

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Molecular BiologybioRxivPreprintDec 6, 2024

Cross-species profiling reveals a conserved core of RNA-dependent proteins in yeast

Nadine Bianca Wäber, Johanna Franziska Seidler, Fabienne Thelen…·Cornelia Kilchert

The paper profiles RNA-dependent proteins in two yeast species, identifies a conserved core and species-specific adaptations, and introduces R-DeeP as a tool for RNA-protein interaction analysis.

DOI 10.1101/2024.12.06.627129

yeastproteomics

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