Author

Sahar Nasr

Stanford MedicineORCID 0009-0009-8159-0826Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Organism:human· 2 Research Focus:cell type annotation· 1 Research Focus:cell-cell communication· 1 Approach:deep learning· 1 Research Focus:differential expression· 1 Research Focus:drug response / drug discovery· 1 Assay:scRNA-seq· 1 Assay:spatial transcriptomics· 1

Frequent Co-Authors

Alex K. ShalekiD· 1 shared Andrew J. GentlesiD· 1 shared Ankit Basak· 1 shared Baochun ZhangiD· 1 shared Berkay ŞímșekiD· 1 shared Bo ZhaoiD· 1 shared Bokai ZhuiD· 1 shared Brooke E. HowittiD· 1 shared

Activity by Year

2024-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 24 mutual co-author links

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1 shared paperSystems Biology

Alex K. ShalekORCID

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2 papers

Recent·Most cited

Deep-learning-driven tumor microenvironment profiling improves immunotherapy response prediction

Ruohan Wang, Brooks A. Benard, Ilayda Ilerten, Sabrina Zdravkovic, Reem Al-Humadi, Sahar Nasr, Brooke Howitt, Andrew J. Gentles

EcoNet improves immunotherapy response prediction by modeling tumor microenvironment signaling networks, outperforming existing methods in AUC and stratifying ccRCC patients by clinical outcome.

bioRxiv · Oct 13, 2026 · PreprintBioinformatics

Same-Slide Spatial Multi-Omics Integration Reveals Tumor Virus-Linked Spatial Reorganization of the Tumor Microenvironment

Yao Yu Yeo, Yuzhou Chang, Huaying Qiu, Stephanie Pei Tung Yiu, Hendrik A. Michel, Wenrui Wu, Xiaojie Jin, Shoko Kure, Lindsay K. Parmelee, Shuli Luo, Precious Cramer, Jia Le Lee, Yang Wang, Jason Yeung, Nourhan El Ahmar, , Sizun Jiang

This paper introduces IN-DEPTH and SGCC for spatial multi-omics analysis, revealing EBV-related immunomodulatory differences in DLBCL.

bioRxiv · Dec 20, 2024 · PreprintSystems Biology