bioRxivSystems Biology
Micro-Magellan: A flexible, open source acquisition software for high throughput biological light microscopy
Henry Pinkard, Nico Stuurman, Kaitlin Corbin, Ronald Vale, Matthew F Krummel
Abstract
We demonstrate the capabilities of Magellan: a flexible, open source microscopy software for reproducible high throughput imaging of biological samples across heterogeneous scales of space and time. Magellan provides a simple user interface for exploration and automated imaging of non-cuboidal regions. By utilizing the hardware abstraction layer of Magellan, Magellan provides a powerful and extensible platform for imaging heterogeneous biological samples on a wide range of existing microscopes.
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