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BioinformaticsNature Methods
Peer-reviewed journal article

Nucleome Browser: An integrative and multimodal data navigation platform for 4D Nucleome

Xiaopeng ZhuiD, Yang ZhangiD, Yuchuan WangiD, Dechao TianiD, Andrew S. BelmontiD, Jason R. SwedlowiD, Jian MaiD

Abstract

We introduce Nucleome Browser (http://www.nucleome.org), an interactive, multimodal data visualization and exploration platform for 4D Nucleome research. Our tool effectively integrates heterogeneous datasets (e.g., genomics, imaging, 3D genome structure models, and single-cell data) and external data portals by a new adaptive communication mechanism. Nucleome Browser provides a scalable solution for integrating massive amounts of 4D Nucleome data to navigate multiscale nuclear structure and function in a wide range of biological contexts, enabling hypothesis generation and data sharing with the broad community.

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02 /Specification & Classification

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