bioRxivCell BiologyPreprint
Loss of transcriptional heterogeneity in aged human muscle stem cells
Abstract
Age-related loss of muscle mass and function negatively impacts healthspan and lifespan. Satellite cells function as muscle stem cells in muscle maintenance and regeneration by self-renewal, activation, proliferation and differentiation. These processes are perturbed in aging at the stem cell population level, contributing to muscle loss. However, how representation of subpopulations within the human satellite cell pool change during aging remains poorly understood. We previously reported a comprehensive baseline of human satellite cell (Hu-MuSCs) transcriptional activity in muscle homeostasis describing functional heterogenous human satellite cell subpopulations such as CAV1+ Hu-MUSCs (Barruet et al., 2020). Here, we sequenced additional satellite cells from new healthy donors and performed extended transcriptomic analyses with regard to aging. We found an age-related loss of global transcriptomic heterogeneity and identified new markers (CAV1, CXCL14, GPX3) along with previously described ones (FN1, ITGB1, SPRY1) that are altered during aging in human satellite cells. These findings describe new transcriptomic changes that occur during aging in human satellite cells and provide a foundation for understanding functional impact.
- organism: human
- assay: scRNA-seq
- research focus: clustering
- research focus: differential expression
- research focus: gene regulatory network inference
- approach: statistical model
Reproducibility ledger
Nobody has reported trying to reproduce this paper yet. Did you replicate an experiment or run the code? Your report saves the next lab a week.
Sign in to file a reproducibility report.
Related papers
- Ageing affects DNA methylation drift and transcriptional cell-to-cell variability in muscle stem cells
Irene Hernando-Herraez, Brendan Evano, … Wolf Reik·Nature CommunicationsPeer-reviewed·Sep 25, 2019
- Human muscle stem cells are refractory to aging
J. S. Novak, D. Mazala, … T. A. Partridge·Aging CellPeer-reviewed·Jun 5, 2021
- Single Cell Deconstruction of Muscle Stem Cell Heterogeneity During Aging Reveals Sensitivity to the Neuromuscular Junction
P. J. Ulintz, J. Larouche, … C. A. Aguilar·bioRxiv·May 28, 2020
- Transcriptional Reprogramming of Skeletal Muscle Stem Cells by the Niche Environment
Felicia Lazure, Rick Farouni, … Vahab D. Soleimani·Nature CommunicationsPeer-reviewed·Feb 1, 2023
- Depletion of resident muscle stem cells inhibits muscle fiber hypertrophy induced by lifelong physical activity
D. Englund, K. Murach, … C. Peterson·bioRxiv·Mar 26, 2019
- Single-cell transcriptional landscape of muscle-derived stem/progenitor cells reveals hallmarks of aging and rejuvenation
Kavitha Mukund, Seth D. Thompson, … Mitra Lavasani·bioRxiv·May 1, 2026