PEACOC - Detecting and classifying a wide range of epileptiform activity patterns in rodents
Katharina HeiningiD, Antje KiliasiD, Philipp JanziD, Carola A. HaasiD, Ulrich EgertiD
Abstract
Epileptiform activity (EA) manifests in diverse patterns of hypersynchronous network activity. Fundamental research mostly addresses two extreme patterns, individual epileptiform spikes and seizures. We developed PEACOC to detect and classify a wide range of EA patterns in local field potentials. PEACOC delimits EA patterns as bursts of epileptiform spikes, and classifies these bursts according to spike load. In EA from kainate-injected mice, burst patterns displayed a continuum of spike loads. With PEACOC, we partitioned this continuum into bursts of high, medium and low spike load. High-load bursts resembled electrographic seizures. The EA patterns automatically retrieved by PEACOC were reproducible and comparable across animals and laboratories. PEACOC has been employed to diagnose the overall burden of EA in individual mice, and to describe epileptic dynamics at multiple time-scales. We here further report that the rate of high-load bursts was anti-correlated to granule cell dispersion in the dentate gyrus.
02 /Specification & Classification
Click any tag to browse matching papers- Citations
- 2
- Organism
- Assay
- Research Focus
- Approach
Reproducibility ledger
Nobody has reported trying to reproduce this paper yet. Did you replicate an experiment or run the code? Your report saves the next lab a week.
Sign in to file a reproducibility report.
Related papers
- Seizure onset location shapes dynamics of initiation
Pariya Salami, Noam Peled, … Sydney S. Cash·Clinical NeurophysiologyPeer-reviewed·May 29, 2020
- The Internal Structure of Seizures Reflects Animal-Specific Trajectories of Disease Progression and Circadian Modulation in Epileptic Mice
Vinícius Lima, Antoine Ghestem, … Damien Depannemaecker·bioRxiv·Aug 25, 2026
- Spectral harmonicity distinguishes two types of ictal phase-amplitude cross frequency couplings in patients candidate to epilepsy surgery
Damián Dellavale, Eugenio Urdapilleta, … Germán Mato·Clinical NeurophysiologyPeer-reviewed·May 18, 2020
- A Predictive Epilepsy Index Based on Probabilistic Classification of Interictal Spike Waveforms
Jesse A. Pfammatter, Rachel A. Bergstrom, … Mathew V. Jones·PLoS ONEPeer-reviewed·Nov 6, 2018
- Region-specific differences and areal interactions underlying transitions in epileptiform activity
Neela Krushna Codadu, R. Ryley Parrish, Andrew J. Trevelyan·The Journal of PhysiologyPeer-reviewed·Jan 25, 2019
- Synaptic transmission modulates while non-synaptic processes govern the transition from pre-ictal to seizure activity in vitro
Marom Bikson, Ana Ruíz‐Nuño, … John G. R. Jefferys·bioRxiv·Mar 11, 2018