bioRxivMolecular BiologyPreprint
Nicotinamide N-methyltransferase couples inflammation and epigenetic remodelling to hepatic fibrosis
Sviatlana Sukhanava, Philipp Valina Allo, Yuanyuan HeiD, Lin CheniD, Yue Zhu, Sonia C. YouhannaiD, Oihane García‐IrigoyeniD, Qi LiiD, Ewa Ellis, Volker Martin LauschkeiD, Eckardt TreuteriD, Rongrong FaniD
Abstract
Chronic inflammation drives the progression of metabolic dysfunction-associated steatotic liver disease (MASLD) to fibrosis, yet how inflammatory signals establish profibrotic transcriptional states in hepatocytes remains poorly understood. Here, we identify nicotinamide N-methyltransferase (NNMT) as a previously unrecognized regulator linking inflammatory cytokine signaling to epigenetic and profibrotic responses in hepatocytes. NNMT was selectively induced by IL-1{beta} and IL-6, but not TNF, and its depletion markedly attenuated cytokine-induced inflammatory and fibrosis-associated transcriptional programs. IL-1{beta} activated NNMT through a JUN/AP-1-dependent pathway, whereas IL-6 sensitized IL-1{beta}-driven responses, an effect partially reversed by NNMT depletion. Integrative transcriptomic and epigenomic analyses revealed that NNMT-dependent gene regulation was associated predominantly with alterations in H3K27 acetylation (H3K27ac) rather than widespread changes in histone methylation. Notably, nicotinamide supplementation closely phenocopied NNMT depletion across cytokine-responsive H3K27ac regions, implicating nicotinamide-dependent regulation in the chromatin response. H3K27ac alterations were strongly concordant with inflammatory and fibrosis-associated transcriptional changes. These findings were further supported in primary human hepatocytes and three-dimensional human liver microtissues, where NNMT depletion reduced cytokine-induced procollagen secretion. Together, our findings identify an inflammation-NNMT-chromatin axis that couples inflammatory cytokine signaling to sustained profibrotic hepatocyte responses and highlight the drug-targetable enzyme NNMT as a potential therapeutic target for limiting MASLD progression and liver fibrosis.
- organism: human
- assay: bulk RNA-seq
- research focus: differential expression
- research focus: gene regulatory network inference
- approach: statistical model
- Citations
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