Neurobiology of DiseaseBioinformaticsPeer-reviewed journal article
Harmonization of CSF and imaging biomarkers for Alzheimer's disease biomarkers: need and practical applications for genetics studies and preclinicalclassification
Jigyasha TimsinaiD, Muhammad AliiD, Anh N. DoiD, Lihua WangiD, Daniel WesterniD, Yun Ju SungiD, Carlos CruchagaiD
Abstract
INTRODUCTIONIn Alzheimers disease (AD) research, cerebrospinal fluid (CSF) Amyloid beta (A{beta}), Tau and pTau are the most accepted and well validated biomarkers. Several methods and platforms exist to measure those biomarkers which leads to challenges in combining data across studies. Thus, there is a need to identify methods that harmonize and standardize these values. METHODSWe used a Z-score based approach to harmonize CSF and amyloid imaging data from multiple cohorts and compared GWAS result using this method with currently accepted methods. We also used a generalized mixture modelling to calculate the threshold for biomarker-positivity. RESULTSZ-scores method performed as well as meta-analysis and did not lead to any spurious results. Cutoffs calculated with this approach were found to be very similar to those reported previously. DISCUSSIONThis approach can be applied to heterogeneous platforms and provides biomarker cut-offs consistent with the classical approaches without requiring any additional data.
- Citations
- 49
- FWCI
- 2.23
- Field percentile
- top 9%
Reproducibility ledger
Nobody has reported trying to reproduce this paper yet. Did you replicate an experiment or run the code? Your report saves the next lab a week.
Sign in to file a reproducibility report.
Related papers
- Genome-wide association study of Alzheimer’s disease CSF biomarkers in the EMIF-AD Multimodal Biomarker Discovery dataset
Shengjun Hong, Dmitry Prokopenko, … Lars Bertram·Translational PsychiatryPeer-reviewed·Nov 22, 2020
- Cerebrospinal fluid reference proteins increase accuracy and interpretability of biomarkers for brain diseases
Linda Karlsson, Jacob W. Vogel, … Oskar Hansson·Nature CommunicationsPeer-reviewed·May 1, 2024
- Bridging Language Markers and Pathology: Correlations Between Digital Speech Measures and Surrogate CSF Biomarkers in Alzheimer's Disease
Yijiang Pang, Liu Chen, … Jiayu Zhou·Alzheimer s & Dementia Diagnosis Assessment & Disease MonitoringPeer-reviewed·Jul 1, 2026
- Integrated Proteomics Reveals Brain-Based Cerebrospinal Fluid Biomarkers in Asymptomatic and Symptomatic Alzheimer’s Disease
Lenora A. Higginbotham, Lingyan Ping, … Nicholas T. Seyfried·Science AdvancesPeer-reviewed·Oct 21, 2020
- Evaluation of harmonization methods to mitigate assay and cohort effects in plasma p-tau217
Vivian Z. Zhang, Pâmela C.L. Ferreira, … Dana Tudorascu·bioRxiv·Jul 28, 2026
- Cognitive Vergence and Pupil Response During Oddball Task are Associated With Alzheimers Disease Cerebrospinal Fluid Neurodegenerative Biomarkers
Ricardo Martínez‐Flores, Isabel Martín-Sobrino, … Hans Supèr·Scientific ReportsPeer-reviewed·Sep 25, 2026