American Journal of Respiratory and Critical Care MedicineBioinformaticsPeer-reviewed journal article
Single-cell RNA expression profiling of ACE2,thereceptor of SARS-CoV-2
Yu ZhaoiD, Zixian ZhaoiD, Yujia WangiD, Yueqing ZhouiD, Yu MaiD, Wei ZuoiD
Abstract
A novel coronavirus SARS-CoV-2 was identified in Wuhan, Hubei Province, China in December of 2019. According to WHO report, this new coronavirus has resulted in 76,392 confirmed infections and 2,348 deaths in China by 22 February, 2020, with additional patients being identified in a rapidly growing number internationally. SARS-CoV-2 was reported to share the same receptor, Angiotensin-converting enzyme 2 (ACE2), with SARS-CoV. Here based on the public database and the state-of-the-art single-cell RNA-Seq technique, we analyzed the ACE2 RNA expression profile in the normal human lungs. The result indicates that the ACE2 virus receptor expression is concentrated in a small population of type II alveolar cells (AT2). Surprisingly, we found that this population of ACE2-expressing AT2 also highly expressed many other genes that positively regulating viral entry, reproduction and transmission. This study provides a biological background for the epidemic investigation of the COVID-19, and could be informative for future anti-ACE2 therapeutic strategy development.
- organism: human
- assay: scRNA-seq
- research focus: cell type annotation
- research focus: differential expression
- approach: statistical model
- Citations
- 916
- FWCI
- 27.65
- Field percentile
- top 1%
Reproducibility ledger
Nobody has reported trying to reproduce this paper yet. Did you replicate an experiment or run the code? Your report saves the next lab a week.
Sign in to file a reproducibility report.
Related papers
- Single-cell analysis of human lung epithelia reveals concomitant expression of the SARS-CoV-2 receptor ACE2 with multiple virus receptors and scavengers in alveolar type II cells
Guangchun Han, Ansam F. Sinjab, … Humam N. Kadara·bioRxiv·Apr 16, 2020
- The protein expression profile of ACE2 in human tissues
F. Hikmet, L. Mear, … C. Lindskog·bioRxiv·Mar 31, 2020
- Gene expression and in situ protein profiling of candidate SARS-CoV-2 receptors in human airway epithelial cells and lung tissue
J. A. Aguiar, B. J.-M. Tremblay, … J. A. Hirota·bioRxiv·Apr 7, 2020
- Single cell RNA sequencing of 13 human tissues identify cell types and receptors of human coronaviruses
- Heterogeneous expression of the SARS-Coronavirus-2 receptor ACE2 in the human respiratory tract
M. E. Ortiz Bezara, A. Thurman, … D. K. Meyerholz·bioRxiv·Apr 22, 2020
- Bioinformatic characterization of angiotensin-converting enzyme 2, the entry receptor for SARS-CoV-2
Harlan R. Barker, Seppo Parkkila·PLoS ONEPeer-reviewed·Oct 28, 2020