Size dependent steady-state saturation limit in biomolecular transport through nuclear membranes
S. Padinhare kandiyil, B. Meethale Mangalassery, H. J, T. Joseph, N. Patincharath, G. K. Varier
Abstract
The nucleus preserves the genomic DNA of eukaryotic organisms and maintains the integrity of the cell by regulating the transport of molecules across the nuclear membrane. It is hitherto assumed that small molecules having a size below the passive permeability limit are allowed to diffuse freely to the nucleus while the transport of larger molecules are regulated via an active mechanism involving energy. Here we report on the kinetics of nuclear import and export of a model system of dextran molecules having a size below the passive permeability limit. The studies carried out using time-lapse confocal fluorescence microscopy show a clear deviation from the passive diffusion model. In particular, it is observed that the steady-state concentration of dextran molecules inside the nucleus is consistently less than the concentration outside, in contradiction to the predictions of the passive diffusion model. Detailed analysis and modeling of the transport show that the nuclear export rates significantly differ from the import rates and the difference in rates is dependent on the size of the molecules. The nuclear export rates are further confirmed by an independent experimental study where we observe the diffusion of dextran molecules from the nucleus directly. Our experiments and transport model would suggest that the nucleus actively rejects exogenous macromolecules even below the passive permeability limit. This result can have significant impact on biomedical research especially in areas related to targeted drug delivery and gene therapy.
02 /Specification & Classification
Click any tag to browse matching papersReproducibility ledger
Nobody has reported trying to reproduce this paper yet. Did you replicate an experiment or run the code? Your report saves the next lab a week.
Sign in to file a reproducibility report.
Related papers
- Percolation transition determines protein size limit for passive transport through the nuclear pore complex
D. N. Winogradoff, H.-Y. Chou, … A. Aksimentiev·bioRxiv·Dec 17, 2021
- Molecular determinants of large cargo transport into the nucleus
E. A. Lemke, G. Paci·bioRxiv·Jul 6, 2019
- Mechanosensitivity of nucleocytoplasmic transport
I. Andreu, I. Granero, … P. Roca-Cusachs·bioRxiv·Jul 23, 2021
- Beyond microtubules: The cellular environment at the endoplasmic reticulum attracts proteins to the nucleus, enabling nuclear transport
Seok Joo Chae, Dae Wook Kim, … Jae Kyoung Kim·iSciencePeer-reviewed·Feb 15, 2024
- Passive diffusion accounts for the majority of intracellular vesicle transport
M. Sittewelle, S. J. Royle·bioRxiv·May 10, 2023
- Actin filaments act as a size-dependent diffusion barrier around centrosomes